BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031C03SP1|AL429356
(784 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1473 0.0
3x_Contig1530 176 8e-44
>3x_Contig1461
Length = 5478
Score = 1473 bits (730), Expect = 0.0
Identities = 759/782 (97%)
Strand = Plus / Plus
Query: 1 gatccggtatgaaaaataaaaaaaactatacatcccacaagaagccaattataaaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3560 gatccggtatgaaaaataaaaaaaactatacatcccacaagaagccaattataaaaaaat 3619
Query: 61 aaaaaaataaaaaaataaaaaaatgaaaaaatgaaaaaatgaaaaataattgamaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3620 aaaaaaataaaaaaataaaaaaatgaaaaaatgaaaaaatgaaaaataattgaaaaaata 3679
Query: 121 tatctaagcmaacaataaagttagctagcccacttcctaaataaattggcctaacaacat 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3680 tatctaagcaaacaataaagttagctagcccacttcctaaataaattggcctaacaacat 3739
Query: 181 actacaaccgtaagccagacacaactactaccactgtmactgcttaagatttcggttgcg 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3740 actacaaccgtaagccagacacaactactaccactgtaactgcttaagatttcggttgcg 3799
Query: 241 gccatatctaccagamagcaccgtttcccgtccgatcaactgtagttaagctggtaagag 300
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3800 gccatatctaccagaaagcaccgtttcccgtccggtcaactgtagttaagctggtaagag 3859
Query: 301 cctgaccgagtagtgtagtgggtgaccatacgcgaaactcaggtgctgcaatcttttttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3860 cctgaccgagtagtgtagtgggtgaccatacgcgaaactcaggtgctgcaatcttttttt 3919
Query: 361 tttttccccctctgcagaagagatgtgaccttcgaacgtttggatgatagcggtaatgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3920 tttttccccctctgcagaagagatgtgaccttcgaacgtttggatgatagcggtaatgca 3979
Query: 421 catttctttttcttttttttttttttttttttttcycccytaaccyaccyacatagtatc 480
||||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||
Sbjct: 3980 catttctttttcttttttttttttttttttttttctcccttaacctacctacatagtatc 4039
Query: 481 mcatttagacgccacttatgagatgaaaaattttcmcatcccgtattcycattgtttacy 540
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 4040 acatttagacgccacttatgagatgaaaaattttcacatcccgtattctcattgtttact 4099
Query: 541 tcyacatataaccccccyaagaacaataagaaagagatgaaacaacccmgatagccatct 600
|| ||||||||| || | |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4100 tctacatataactcctctaagaacaataagaaagagatgaaacaacccagatagccatct 4159
Query: 601 tgttgccacttaatatagcygcmttccaacagaccacgccggttctcaaacccgacgtac 660
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 4160 tgttgccacttaatatagctgcattccaacagaccacgccggttctcaaacccgacgtac 4219
Query: 661 attcttgctcagtwgtggccgcwwttcacttctttttctctgatcctttctcaagatatt 720
||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4220 attcttgctcagtagtggccgcaattcacttctttttctctgatcctttctcaagatatt 4279
Query: 721 agatttgactgcggtcatcgtagaatagcgcaacaccacaggaaaatcgaggccttgtgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4280 agatttgactgcggtcatcgtagaatagcgcaacaccacaggaaaatcgaggccttgtgt 4339
Query: 781 at 782
||
Sbjct: 4340 at 4341
>3x_Contig1530
Length = 6216
Score = 176 bits (87), Expect = 8e-44
Identities = 135/153 (88%)
Strand = Plus / Minus
Query: 624 ttccaacagaccacgccggttctcaaacccgacgtacattcttgctcagtwgtggccgcw 683
|||||| ||||| |||||||| |||||||| ||| ||||||||||||||| | |||| |
Sbjct: 6208 ttccaaaagaccccgccggttttcaaaccccacgaacattcttgctcagtaggggcccca 6149
Query: 684 wttcacttctttttctctgatcctttctcaagatattagatttgactgcggtcatcgtag 743
||||| |||||||| |||| || ||||||| ||||||||||| ||||||||||||||||
Sbjct: 6148 attcacctctttttccctgaacccttctcaaaatattagattttactgcggtcatcgtag 6089
Query: 744 aatagcgcaacaccacaggaaaatcgaggcctt 776
|||||||||||||| |||||||| |||||||||
Sbjct: 6088 aatagcgcaacaccccaggaaaaacgaggcctt 6056
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 31,773
Number of Sequences: 1807
Number of extensions: 31773
Number of successful extensions: 7802
Number of sequences better than 1.0e-20: 2
length of query: 784
length of database: 10,358,551
effective HSP length: 16
effective length of query: 768
effective length of database: 10,329,639
effective search space: 7933162752
effective search space used: 7933162752
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.4 bits)